Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941917.1_cds_XP_016485601.1_76513
CDS Infomation

[gene=LOC107806003] [db_xref=GeneID:107806003] [protein=30-kDa cleavage and polyadenylation specificity factor 30-like] [protein_id=XP_016485601.1] [location=join(32517..32911,33499..33696,33732..33896,39491..39653,39883..39993,40832..40900,41371..41457,43030..43887)] [gbkey=CDS]
Sequence

ATGGACGAAGGAGAAGGGGGTTTAAGCTTTGATTTCGAGGGCGGCTTAGACACTGGGCCG
ACACACCCAACTGCTTCCGTACCAGTAATGACACAATCTTCCGATCACAACATTGCCGCG
GCCGCCGCCCCAAATGCTAACATTAACCAGCCCCCTACTGTCTCAGCCCATGTAGGCGGG
GATGTAGGGTTTGTTGGCAATCGTCGGAGTTTCAGGCAGACTGTTTGCCGCCACTGGCTA
CGGTCACTGTGTATGAAGGGTGAAGCCTGTGGCTTTCTTCATCAGTATGATAAATCTCGA
ATGCCAATCTGTCGGTTTTTTAGACTGTATGGGGAGTGCCGTGAACAGGACTGTGTTTAT
AAGCACACCATTGAGGATATCAAGGAATGCAACATGTACAAATTGGGGTTTTGTCCAAAT
GGTCCTGATTGTCGATATAGACATGCAAAGTTGCCCGGACCTCCACCACCAGTGGAAGAA
GTTCTTCAGAAAATTCAGCATCTGGCGTCCAACAACTATGGTTACTCAAACAGGTTTTAC
CAAAACCGGAATGCTAATTATTCAACACAGGCTGAGAAATCTNCAAACCTCAAATCTACA
GCAACTGAGACACCCATTATACAACAGATCCAGCCTCATCAACAACAAGCTTTACAGACT
CAACAACAGGGTGGCACAACTCAAACACAAATTCATCCCAATGGCCAGCAAAATCAAGCA
GATAGGACTGCAGTAGTTCTGCCTCAAGGAACCTCTAGGTACTTTATAGTTAAAAGCTGC
AACCGTGAGAATCTTGAATTGTCGGTACAACAAGGAGTTTGGGCAACTCAAAGAAGCAAT
GAGGCTAAACTAAATGAAGCTTTTGACTCCGTGGAAAATGTTATTCTGATATTTTCAGTT
AATCGGACTAGACATTTTCAGGGTTGTGCAAAGATGACATCTAGAATTGGTGGCGCTGCT
AAAGGAGGAAATTGGAAGCATGAACATGGAACTGCCCATTATGGACGTAATTTTTCAGTA
AAATGGTTAAAGCTGTGTGAACTGTCCTTCCAGAAAACTCACCACTTGAGGAATCCATAC
AATGAGAACTTACCAGTGAAGATAAGCAGAGATTGTCAAGAATTAGAACCCTCTGTTGGT
GAGCAGTTGGCTTCTTTGCTTTATCTTGAACCAGATAGCGAACTTATGGCAATCTCACTT
GCAGCAGAATCCAAGAGACAGGAAGAAAAGGCGAAGGGAGTGAACCCTGACAATGGGAAT
GATAATCCAGATATTGTACCATTTGAAGACAATGAAGAAGAGGAAGATGAAGAAAGTGAG
GACGAGGATGAAAGCTTTGATCAAGGTTTCGGACCAGCTGCTCTTGGCAGAGGAAGGGGG
AGGGGAATTGTGTGGCCTCCAATAATGCCTTTAGGACATGGGCCCAGGCCTCTTCCTGGG
ATGCGGGGCTTCCCTCCGGGCATGATGGGTGATGGATTTTCTTATGGAGCTATGACACCT
GATGGTTTTCCAATGCCTGATCATTTTGGAATGGGTCCCAGACCTTTTGGTCCATATGGC
CCACGATTTTCAAATGATATGATGTTTCATGGCCGCCCTCCAGCTGGTGGATTTGGGATG
ATGATGGGTCCCGGAAGGCCCCCTTTCATGGGCGGGATGGGTCCCGGAGCGACAGGCCCA
CCCAGAGCTGGTCGAGCAGTTGGTATGCATCCATCATTTGTTCCACCCTCATCTCAGCCT
TCTCAAAATCCTTATAGGCCTAAAAGAGAACAGAGAGCTCCAGTTCATGACAGGAATGAT
AGATTCAGCTCCGGTTCAGATCAAGGTAAGGGTCAGGAGATGGCGGGCTCAGTTGGTGGA
CCAGATGGAGTAAATTATCCCCAAAGAGGGAAAACCGAACAAGATGCCCAGTTTGGTGCT
GGAAACGGCTTCAAAAATGATGAAAGCGAAAGTGAGGATGAAGCACCAAGAAGATCAAGA
CATGGGGATGGAAAGAAGAAGAGGCGGGATACTGATGATGATGCTGCAACTGCTTCAGAA
AAATAG

Peptide Sequence

PEP ID

XP_016485601.1
PEP Infomation

PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30-like [Nicotiana tabacum]
Sequence

MDEGEGGLSFDFEGGLDTGPTHPTASVPVMTQSSDHNIAAAAAPNANINQPPTVSAHVGG
DVGFVGNRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVY
KHTIEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLASNNYGYSNRFY
QNRNANYSTQAEKSXNLKSTATETPIIQQIQPHQQQALQTQQQGGTTQTQIHPNGQQNQA
DRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSV
NRTRHFQGCAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSVKWLKLCELSFQKTHHLRNPY
NENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRQEEKAKGVNPDNGN
DNPDIVPFEDNEEEEDEESEDEDESFDQGFGPAALGRGRGRGIVWPPIMPLGHGPRPLPG
MRGFPPGMMGDGFSYGAMTPDGFPMPDHFGMGPRPFGPYGPRFSNDMMFHGRPPAGGFGM
MMGPGRPPFMGGMGPGATGPPRAGRAVGMHPSFVPPSSQPSQNPYRPKREQRAPVHDRND
RFSSGSDQGKGQEMAGSVGGPDGVNYPQRGKTEQDAQFGAGNGFKNDESESEDEAPRRSR
HGDGKKKRRDTDDDAATASEK

Transcript Sequence

Gene sequence data has not been registered.